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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905211.1_cds_XP_016455418.1_49350
CDS Infomation

[gene=LOC107779488] [db_xref=GeneID:107779488] [protein=proline--tRNA ligase, chloroplastic/mitochondrial-like] [protein_id=XP_016455418.1] [location=join(9669..10001,10681..10737,11625..11735,12861..12947,13041..13154,13243..13449,13565..13702,14045..14206,14551..14750,15431..15514,15620..15761)] [gbkey=CDS]
Sequence

ATGGGGGCGCTAAGGCTACCCGCTTTAACTTCAATCTTCACTTCCTCCTCCGTCAGGTCG
CCGCCGGCACTGAAACATCGCCTCCGATTTCCTCTCCGTAGACCTTTCTCGGCGCAGAGC
ACCGCCGAGAAAGCGGTAGCTACAGAACTTGGAGATGGAAAGTCGGCCAAAGTTGTAGAT
AAAGAGAAAGAGAGAGTGATAACTCCGCGTTCTCAGGACTTCAACGCTTGGTATTTAGAT
GTAATTGCAAATGCGGAGCTTGCTGACTATGGTCCAGTTCGTGGTACCATGGTTATTCGT
CCCTATGGTTACGCTATTTGGGAAGCTATACAGGATTACTTGAATGTGAAGTTTAAAGAA
ACTGGACACAGTAATATGTATTTCCCTCAGTTTATACCCTATTCCTTCATTGAGAAAGAA
GCTAGTCATGTTGAGGGTTTTAGTCCAGAATTAGCTCTTGTTACTGTTGGAGGAGGAAAG
GAACTTGAAGAAAAGCTTGTGGTTCGACCTACTAGTGAAACAATTGTTAATCATATGTTT
ACTCAATGGATCCACAGTTACCGTGATCTTCCTCTCATGATCAATCAGTGGGCAAATGTC
ACAAGATGGGAGATGCGAACCAAACCATTTATTAGGACGCTTGAATTTCTTTGGCAGGAG
GGCCATACTGCCCATGCCACTGCAGAGGAAGCAGAAAAAGAGGCAATGCAGATGATCGAT
GTGTATATAAAATTTGCTTATGAGCAAGCTGCAATACCTGTTATTGCAGGTAGGAAATCT
AGGGTGGAGACATTTGCTGGTGCTTCAAGGACCTATACAATTGAAGCAATGATGGGAGAC
AGGAAGGCTTTGCAGGCTGGCACAAGCCACAACCTTGGTCAGAATTTTTCGCGTGCATTT
AATACACAGTTCACAGATGAAAATGGGCAACGACAACATGTTTGGCAGACATCATGGGCA
ATTAGCACTCGCTTTGTGGGAGGTATTATCATGACACATGGGGATGATGCCGGCTTACTG
CTGCCCCCAAGGCTGGCACCTGTGCAGGTTGTTATTGTCCCAATATGGAAGAAGGACAAT
GAGAAGACGGGAGTTCTGACTGCTTCATCATCTGTGAAAGAAGCTTTACAATCTGTAGGG
ATAAAAGTGAAGATTGATGACACGGATCAGAGAACGCCTGGGTGGAAATTCAACTTCTAT
GAAATGAAGGGAGTCCCTTTGAGGATTGAAATTGGCCCCCGAGATGTTTCAAGTGGAACC
GTGGTCATCTCTAGGAGAGATGTTCCCGGAAAGCAAGGGAAGGTTTTTGGAATATCCATG
GAGCCTTCATCCCTGGTGGCTTACGTCATAGACAAGTTGAATGAGGTTCAATCATCCCTT
TTGGAAAGGGCAACAACTTTTCGTGATAGTAACATCGTTGATGTGTCTTCATATAATGAG
CTTAAGGAGGCAATAGCTCAAGGAAAATGGGCGAGGGGGCCTTGGTCAGCTAGTGACGAG
GAAGAATTGAAGGTAAAAGAAGAAACAGGAGCAACCATTAGATGTTTCCCTTTTGAGCAG
CCTGAGGGACCAAAGAAGTGCTTGATGACGGGCAATTCAGCAGATGAAGTTGCAATATTT
GCCAAATCTTATTAG

Peptide Sequence

PEP ID

XP_016455418.1
PEP Infomation

PREDICTED: proline--tRNA ligase, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MGALRLPALTSIFTSSSVRSPPALKHRLRFPLRRPFSAQSTAEKAVATELGDGKSAKVVD
KEKERVITPRSQDFNAWYLDVIANAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKE
TGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGKELEEKLVVRPTSETIVNHMF
TQWIHSYRDLPLMINQWANVTRWEMRTKPFIRTLEFLWQEGHTAHATAEEAEKEAMQMID
VYIKFAYEQAAIPVIAGRKSRVETFAGASRTYTIEAMMGDRKALQAGTSHNLGQNFSRAF
NTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDAGLLLPPRLAPVQVVIVPIWKKDN
EKTGVLTASSSVKEALQSVGIKVKIDDTDQRTPGWKFNFYEMKGVPLRIEIGPRDVSSGT
VVISRRDVPGKQGKVFGISMEPSSLVAYVIDKLNEVQSSLLERATTFRDSNIVDVSSYNE
LKEAIAQGKWARGPWSASDEEELKVKEETGATIRCFPFEQPEGPKKCLMTGNSADEVAIF
AKSY

Transcript Sequence

Gene sequence data has not been registered.